Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm38241-201ENSMUST00000192641 898 ntBASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Gm18062-201ENSMUST00000208020 547 ntBASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Gm18055-201ENSMUST00000208254 547 ntBASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ube4bQ9ES00 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Gm23931-201ENSMUST00000103842 109 ntBASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Gm22018-201ENSMUST00000104357 131 ntBASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Gm5187-201ENSMUST00000117317 991 ntBASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Gm15610-201ENSMUST00000120584 195 ntBASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Gm14999-201ENSMUST00000121039 624 ntBASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.82□□□□□ -0.68
Ube4bQ9ES00 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.82□□□□□ -0.68
Ube4bQ9ES00 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.82□□□□□ -0.68
Ube4bQ9ES00 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Gm39404-201ENSMUST00000216350 313 ntBASIC10.82□□□□□ -0.68
Ube4bQ9ES00 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.82□□□□□ -0.68
Ube4bQ9ES00 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ube4bQ9ES00 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Gm12463-201ENSMUST00000118271 849 ntBASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Gm14247-201ENSMUST00000120950 237 ntBASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Gm13316-201ENSMUST00000140537 691 ntBASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Gm43133-201ENSMUST00000197472 463 ntBASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms