Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm28695-201ENSMUST00000190300 697 ntBASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm37448-201ENSMUST00000192795 697 ntBASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm44262-201ENSMUST00000204969 372 ntBASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm45433-201ENSMUST00000209386 247 ntBASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.16□□□□□ -0.62
Lima1Q9ERG0 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Lima1Q9ERG0 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Gm3329-201ENSMUST00000159873 556 ntBASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Gm43438-201ENSMUST00000198133 379 ntBASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Gm4157-201ENSMUST00000211647 679 ntBASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lima1Q9ERG0 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Lima1Q9ERG0 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Lima1Q9ERG0 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.15□□□□□ -0.63
Lima1Q9ERG0 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Lima1Q9ERG0 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.14□□□□□ -0.63
Lima1Q9ERG0 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lima1Q9ERG0 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.14□□□□□ -0.63
Lima1Q9ERG0 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.14□□□□□ -0.63
Lima1Q9ERG0 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lima1Q9ERG0 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lima1Q9ERG0 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.14□□□□□ -0.63
Lima1Q9ERG0 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lima1Q9ERG0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lima1Q9ERG0 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Lima1Q9ERG0 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lima1Q9ERG0 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Lima1Q9ERG0 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lima1Q9ERG0 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Lima1Q9ERG0 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lima1Q9ERG0 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lima1Q9ERG0 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Lima1Q9ERG0 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lima1Q9ERG0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lima1Q9ERG0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms