Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm5051-201ENSMUST00000204085 485 ntBASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Gm10179-201ENSMUST00000086233 688 ntBASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Gm3329-201ENSMUST00000159873 556 ntBASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Tubb3Q9ERD7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tubb3Q9ERD7 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms