Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm42627-201ENSMUST00000197347 224 ntBASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Gm43974-201ENSMUST00000205080 684 ntBASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim42Q9D2H5 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Trim42Q9D2H5 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Trim42Q9D2H5 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Trim42Q9D2H5 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Trim42Q9D2H5 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Gm9230-201ENSMUST00000188228 532 ntBASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 AC132446.1-201ENSMUST00000222655 226 ntBASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim42Q9D2H5 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Gm11989-201ENSMUST00000117240 672 ntBASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Gm11362-201ENSMUST00000118838 850 ntBASIC11.38□□□□□ -0.59
Trim42Q9D2H5 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.38□□□□□ -0.59
Trim42Q9D2H5 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms