Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Mir6359-201ENSMUST00000183668 81 ntBASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Gm19927-201ENSMUST00000185792 781 ntBASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Gm37851-201ENSMUST00000193871 889 ntBASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Gm30055-201ENSMUST00000203175 803 ntBASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.59□□□□□ -0.55
Cldnd1Q9CQX5 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Cldnd1Q9CQX5 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cldnd1Q9CQX5 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cldnd1Q9CQX5 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 AC154354.1-203ENSMUST00000225565 1364 ntBASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cldnd1Q9CQX5 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Gm44640-201ENSMUST00000206894 247 ntBASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 n-R5s71-201ENSMUST00000093668 119 ntBASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cldnd1Q9CQX5 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms