Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf2a1Q99PM3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf2a1Q99PM3 Limk2-204ENSMUST00000110029 2939 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf2a1Q99PM3 Fgd3-202ENSMUST00000110086 2628 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf2a1Q99PM3 Fam221b-201ENSMUST00000056474 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf2a1Q99PM3 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.28□□□□□ -0.44
Gtf2a1Q99PM3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf2a1Q99PM3 L1cam-201ENSMUST00000066576 4116 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Gtf2a1Q99PM3 D2hgdh-202ENSMUST00000112881 3459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf2a1Q99PM3 Entpd5-206ENSMUST00000122194 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf2a1Q99PM3 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.28□□□□□ -0.44
Gtf2a1Q99PM3 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.28□□□□□ -0.44
Gtf2a1Q99PM3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf2a1Q99PM3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf2a1Q99PM3 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf2a1Q99PM3 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf2a1Q99PM3 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Gtf2a1Q99PM3 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gtf2a1Q99PM3 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Gtf2a1Q99PM3 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC12.27□□□□□ -0.44
Gtf2a1Q99PM3 BC017643-202ENSMUST00000106115 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gtf2a1Q99PM3 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gtf2a1Q99PM3 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gtf2a1Q99PM3 Slc1a7-201ENSMUST00000106713 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gtf2a1Q99PM3 Olfr601-202ENSMUST00000210431 2266 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
Gtf2a1Q99PM3 Slc7a9-201ENSMUST00000032703 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gtf2a1Q99PM3 Srp54b-201ENSMUST00000164243 2317 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Gtf2a1Q99PM3 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Gtf2a1Q99PM3 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Gtf2a1Q99PM3 Tomt-201ENSMUST00000106969 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gtf2a1Q99PM3 Nek11-201ENSMUST00000038648 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gtf2a1Q99PM3 1700017G19Rik-201ENSMUST00000035860 2437 ntTSL 2 BASIC12.27□□□□□ -0.44
Gtf2a1Q99PM3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gtf2a1Q99PM3 Pik3c3-203ENSMUST00000115812 3257 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Gm15467-201ENSMUST00000120582 445 ntBASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Gm42550-201ENSMUST00000201553 960 ntBASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 AI463170-201ENSMUST00000217839 970 ntBASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Snrpd3-201ENSMUST00000020397 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Gpr85-202ENSMUST00000115491 2165 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Kif28-203ENSMUST00000221136 3538 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Tbx19-201ENSMUST00000027859 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Slc25a44-201ENSMUST00000057935 3577 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Atg13-201ENSMUST00000028678 3604 ntTSL 5 BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 C2-205ENSMUST00000148431 1946 ntTSL 5 BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Gm30373-201ENSMUST00000215774 3500 ntTSL 5 BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Gm5114-201ENSMUST00000108017 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 Arhgef3-201ENSMUST00000049206 3585 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf2a1Q99PM3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Gulo-201ENSMUST00000059970 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Unc45b-205ENSMUST00000164945 3555 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Gm27494-201ENSMUST00000184735 189 ntBASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Gm6007-201ENSMUST00000208170 823 ntBASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Zfp563-201ENSMUST00000131722 1938 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 D3Ertd751e-201ENSMUST00000026867 1989 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Gm43366-201ENSMUST00000199829 2655 ntBASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Apol11b-201ENSMUST00000166623 2057 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Zfp536-206ENSMUST00000176205 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Atp9a-202ENSMUST00000109175 3729 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 A730018C14Rik-201ENSMUST00000050754 2253 ntTSL 2 BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf2a1Q99PM3 Lin7a-202ENSMUST00000105280 1634 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms