Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Gm43362-201ENSMUST00000198192 2470 ntBASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Gm45663-201ENSMUST00000210429 1632 ntBASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Snrp1c-ps1-201ENSMUST00000205464 474 ntBASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Gm8960-201ENSMUST00000219787 788 ntBASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Gm18783-201ENSMUST00000220465 1151 ntBASIC11.16□□□□□ -0.62
Cdh23Q99PF4 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cdh23Q99PF4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Gm14153-201ENSMUST00000119923 1139 ntBASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Gm13071-201ENSMUST00000122237 376 ntBASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Gm16301-201ENSMUST00000161959 295 ntBASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC11.15□□□□□ -0.62
Cdh23Q99PF4 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh23Q99PF4 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Gm5472-201ENSMUST00000178604 1678 ntBASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh23Q99PF4 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Gm9353-201ENSMUST00000200472 604 ntBASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Gm9273-201ENSMUST00000200606 715 ntBASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh23Q99PF4 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Gm42467-201ENSMUST00000202954 1447 ntBASIC11.15□□□□□ -0.62
Cdh23Q99PF4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh23Q99PF4 Gm2492-201ENSMUST00000221355 1394 ntBASIC11.15□□□□□ -0.63
Cdh23Q99PF4 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.15□□□□□ -0.63
Cdh23Q99PF4 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh23Q99PF4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Cdh23Q99PF4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh23Q99PF4 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh23Q99PF4 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cdh23Q99PF4 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Gm15702-201ENSMUST00000119680 444 ntBASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Gm24346-201ENSMUST00000158712 194 ntBASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Gm45110-201ENSMUST00000205704 1402 ntBASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Gm15727-201ENSMUST00000122416 437 ntBASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Gm16184-201ENSMUST00000162324 573 ntBASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Gm18299-201ENSMUST00000192026 636 ntBASIC11.14□□□□□ -0.63
Cdh23Q99PF4 AC154806.7-201ENSMUST00000227998 202 ntBASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdh23Q99PF4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Gm20281-201ENSMUST00000188225 267 ntBASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Gm44716-201ENSMUST00000209007 710 ntBASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh23Q99PF4 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms