Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm25881-201ENSMUST00000157783 103 ntBASIC11□□□□□ -0.65
Rnf111Q99ML9 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11□□□□□ -0.65
Rnf111Q99ML9 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11□□□□□ -0.65
Rnf111Q99ML9 Gm43377-201ENSMUST00000201640 455 ntBASIC11□□□□□ -0.65
Rnf111Q99ML9 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11□□□□□ -0.65
Rnf111Q99ML9 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11□□□□□ -0.65
Rnf111Q99ML9 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11□□□□□ -0.65
Rnf111Q99ML9 AC113082.1-201ENSMUST00000217324 327 ntBASIC11□□□□□ -0.65
Rnf111Q99ML9 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Rnf111Q99ML9 CT025694.1-201ENSMUST00000226188 934 ntBASIC11□□□□□ -0.65
Rnf111Q99ML9 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11□□□□□ -0.65
Rnf111Q99ML9 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Rnf111Q99ML9 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rnf111Q99ML9 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Rnf111Q99ML9 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Rnf111Q99ML9 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Gm12266-201ENSMUST00000120311 962 ntBASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Gm17040-202ENSMUST00000170597 889 ntBASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.99□□□□□ -0.65
Rnf111Q99ML9 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rnf111Q99ML9 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.98□□□□□ -0.65
Rnf111Q99ML9 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Gm12501-201ENSMUST00000119163 529 ntBASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Gm12176-201ENSMUST00000121420 875 ntBASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms