Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm6439-201ENSMUST00000199849 862 ntBASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.17□□□□□ -0.46
Tlr3Q99MB1 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Gm25148-201ENSMUST00000104611 123 ntBASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Gm15374-201ENSMUST00000119313 844 ntBASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tlr3Q99MB1 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Gm12419-201ENSMUST00000116649 636 ntBASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Gm4654-201ENSMUST00000183305 982 ntBASIC12.15□□□□□ -0.46
Tlr3Q99MB1 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Gm38210-201ENSMUST00000191944 809 ntBASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Gm42867-201ENSMUST00000202995 469 ntBASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tlr3Q99MB1 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms