Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.71□□□□□ -0.7
Nkx6-1Q99MA9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx6-1Q99MA9 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx6-1Q99MA9 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Gm23255-201ENSMUST00000102244 110 ntBASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Mir744-201ENSMUST00000103261 100 ntBASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Gm12389-201ENSMUST00000117696 418 ntBASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Gm14034-201ENSMUST00000120147 551 ntBASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Mir432-201ENSMUST00000157230 75 ntBASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Gm9372-201ENSMUST00000168454 430 ntBASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Gm20495-201ENSMUST00000173902 235 ntBASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Mir6953-201ENSMUST00000184745 68 ntBASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Gm17796-201ENSMUST00000189015 1213 ntBASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Gm37452-201ENSMUST00000194416 1160 ntBASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Gm45481-201ENSMUST00000209717 877 ntBASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Gm4903-201ENSMUST00000210462 405 ntBASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 CT025689.1-201ENSMUST00000225214 283 ntBASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Arhgef33-210ENSMUST00000225548 456 ntBASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx6-1Q99MA9 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Gm22937-201ENSMUST00000103954 131 ntBASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Gm23745-201ENSMUST00000104230 125 ntBASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Gm9166-201ENSMUST00000120293 561 ntBASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC10.69□□□□□ -0.7
Nkx6-1Q99MA9 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms