Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm26286-201ENSMUST00000104166 134 ntBASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm11930-201ENSMUST00000117788 190 ntBASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm14071-201ENSMUST00000117817 509 ntBASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cttnbp2nlQ99LJ0 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm27516-201ENSMUST00000184237 98 ntBASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm5982-201ENSMUST00000196234 512 ntBASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm43179-201ENSMUST00000198797 275 ntBASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm18054-201ENSMUST00000207539 555 ntBASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm18935-201ENSMUST00000212692 664 ntBASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cttnbp2nlQ99LJ0 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.42□□□□□ -0.58
Cttnbp2nlQ99LJ0 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms