Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC169511.1-201ENSMUST00000227639 995 ntBASIC11.98□□□□□ -0.49
Clp1Q99LI9 AC124408.1-201ENSMUST00000228938 707 ntBASIC11.98□□□□□ -0.49
Clp1Q99LI9 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.98□□□□□ -0.49
Clp1Q99LI9 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clp1Q99LI9 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Clp1Q99LI9 AC154186.1-201ENSMUST00000227711 1597 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Gm6630-201ENSMUST00000119199 454 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 Gm23647-201ENSMUST00000175042 109 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 Rn5s-201ENSMUST00000177555 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 Gm22109-201ENSMUST00000177995 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 Gm22291-201ENSMUST00000178027 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 Gm23284-201ENSMUST00000178069 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 Gm25018-201ENSMUST00000179081 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 Gm25212-201ENSMUST00000179432 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 Gm26391-201ENSMUST00000179843 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 Gm19927-201ENSMUST00000185792 781 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 Gm8384-201ENSMUST00000190905 704 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Gm19080-201ENSMUST00000196082 550 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Gm43037-201ENSMUST00000196808 250 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 Gm42867-201ENSMUST00000202995 469 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC11.97□□□□□ -0.49
Clp1Q99LI9 CT030135.2-201ENSMUST00000225255 893 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Mir326-201ENSMUST00000083637 95 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 Gm24089-201ENSMUST00000093696 109 ntBASIC11.97□□□□□ -0.49
Clp1Q99LI9 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Clp1Q99LI9 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms