Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Gm2260-201ENSMUST00000184965 657 ntBASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.95□□□□□ -0.66
Cstf3Q99LI7 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.95□□□□□ -0.66
Cstf3Q99LI7 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cstf3Q99LI7 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.94□□□□□ -0.66
Cstf3Q99LI7 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Gm15515-201ENSMUST00000117827 822 ntBASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Gm15808-201ENSMUST00000119046 604 ntBASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Gm3150-201ENSMUST00000166418 204 ntBASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Gm6722-201ENSMUST00000221586 390 ntBASIC10.94□□□□□ -0.66
Cstf3Q99LI7 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cstf3Q99LI7 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms