Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha3Q91Y16 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Gm12247-201ENSMUST00000117585 670 ntBASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Gm15131-201ENSMUST00000119124 595 ntBASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Gm7467-201ENSMUST00000185173 652 ntBASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Gm43186-201ENSMUST00000198130 824 ntBASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Gm45398-201ENSMUST00000210561 165 ntBASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Gm10179-201ENSMUST00000086233 688 ntBASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pcdha3Q91Y16 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Gm11836-201ENSMUST00000121022 441 ntBASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Gm22334-201ENSMUST00000158070 133 ntBASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha3Q91Y16 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms