Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tram1Q91V04 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tram1Q91V04 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tram1Q91V04 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tram1Q91V04 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tram1Q91V04 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.73□□□□□ -0.85
Tram1Q91V04 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.73□□□□□ -0.85
Tram1Q91V04 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tram1Q91V04 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.73□□□□□ -0.85
Tram1Q91V04 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.73□□□□□ -0.85
Tram1Q91V04 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC9.72□□□□□ -0.85
Tram1Q91V04 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Gm11735-201ENSMUST00000106377 1581 ntBASIC9.72□□□□□ -0.85
Tram1Q91V04 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Gm44573-201ENSMUST00000191753 2370 ntBASIC9.72□□□□□ -0.85
Tram1Q91V04 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Tram1Q91V04 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Tram1Q91V04 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC9.72□□□□□ -0.85
Tram1Q91V04 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC9.72□□□□□ -0.85
Tram1Q91V04 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.72□□□□□ -0.85
Tram1Q91V04 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC9.72□□□□□ -0.85
Tram1Q91V04 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Gm37301-201ENSMUST00000195412 568 ntBASIC9.72□□□□□ -0.85
Tram1Q91V04 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Gm19187-201ENSMUST00000206781 892 ntBASIC9.72□□□□□ -0.85
Tram1Q91V04 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC9.72□□□□□ -0.85
Tram1Q91V04 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.72□□□□□ -0.85
Tram1Q91V04 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.72□□□□□ -0.85
Tram1Q91V04 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Tram1Q91V04 Gm5705-201ENSMUST00000066241 711 ntBASIC9.72□□□□□ -0.85
Tram1Q91V04 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Tram1Q91V04 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Tram1Q91V04 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Tram1Q91V04 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tram1Q91V04 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Tram1Q91V04 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tram1Q91V04 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Tram1Q91V04 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC9.71□□□□□ -0.85
Tram1Q91V04 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tram1Q91V04 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Tram1Q91V04 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tram1Q91V04 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tram1Q91V04 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Tram1Q91V04 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.71□□□□□ -0.85
Tram1Q91V04 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tram1Q91V04 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tram1Q91V04 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
Tram1Q91V04 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Tram1Q91V04 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Tram1Q91V04 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Tram1Q91V04 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tram1Q91V04 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Tram1Q91V04 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tram1Q91V04 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tram1Q91V04 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tram1Q91V04 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Tram1Q91V04 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.71□□□□□ -0.86
Tram1Q91V04 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Tram1Q91V04 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC9.71□□□□□ -0.86
Tram1Q91V04 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tram1Q91V04 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Tram1Q91V04 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tram1Q91V04 Gm43118-201ENSMUST00000199149 775 ntBASIC9.71□□□□□ -0.86
Tram1Q91V04 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tram1Q91V04 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Tram1Q91V04 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tram1Q91V04 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC9.71□□□□□ -0.86
Tram1Q91V04 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tram1Q91V04 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tram1Q91V04 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Tram1Q91V04 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms