Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.7□□□□□ -0.54
Trim60Q8VI40 Gm44262-201ENSMUST00000204969 372 ntBASIC11.7□□□□□ -0.54
Trim60Q8VI40 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.7□□□□□ -0.54
Trim60Q8VI40 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim60Q8VI40 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.7□□□□□ -0.54
Trim60Q8VI40 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim60Q8VI40 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim60Q8VI40 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.69□□□□□ -0.54
Trim60Q8VI40 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.69□□□□□ -0.54
Trim60Q8VI40 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Gm13916-201ENSMUST00000117368 628 ntBASIC11.69□□□□□ -0.54
Trim60Q8VI40 Gm15617-201ENSMUST00000118973 771 ntBASIC11.69□□□□□ -0.54
Trim60Q8VI40 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.69□□□□□ -0.54
Trim60Q8VI40 Gm13263-201ENSMUST00000121271 838 ntBASIC11.69□□□□□ -0.54
Trim60Q8VI40 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Gm25881-201ENSMUST00000157783 103 ntBASIC11.69□□□□□ -0.54
Trim60Q8VI40 Gm8459-201ENSMUST00000162504 760 ntBASIC11.69□□□□□ -0.54
Trim60Q8VI40 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trim60Q8VI40 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim60Q8VI40 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.69□□□□□ -0.54
Trim60Q8VI40 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.69□□□□□ -0.54
Trim60Q8VI40 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.69□□□□□ -0.54
Trim60Q8VI40 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.69□□□□□ -0.54
Trim60Q8VI40 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.69□□□□□ -0.54
Trim60Q8VI40 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim60Q8VI40 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.68□□□□□ -0.54
Trim60Q8VI40 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.68□□□□□ -0.54
Trim60Q8VI40 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.68□□□□□ -0.54
Trim60Q8VI40 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Gm12247-201ENSMUST00000117585 670 ntBASIC11.68□□□□□ -0.54
Trim60Q8VI40 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim60Q8VI40 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms