Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Gm7851-201ENSMUST00000117574 323 ntBASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Gm44506-201ENSMUST00000206278 965 ntBASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cchcr1Q8K2I2 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Gm13809-201ENSMUST00000117921 597 ntBASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Gm11941-201ENSMUST00000119904 610 ntBASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Gm11450-201ENSMUST00000121144 333 ntBASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Mup-ps29-201ENSMUST00000122281 202 ntBASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Gm7741-201ENSMUST00000181445 989 ntBASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 AC154314.2-201ENSMUST00000223677 3502 ntBASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cchcr1Q8K2I2 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Gm4294-201ENSMUST00000105169 614 ntBASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Gm14058-201ENSMUST00000116082 735 ntBASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Gm15549-201ENSMUST00000121595 622 ntBASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Gm24844-201ENSMUST00000158679 127 ntBASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Gm27552-201ENSMUST00000183351 62 ntBASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Gm27844-201ENSMUST00000183613 62 ntBASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.35□□□□□ -0.27
Cchcr1Q8K2I2 Gm7504-201ENSMUST00000201449 424 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms