Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.08□□□□□ -0.8
ShfQ8CG80 Gm28329-201ENSMUST00000191208 689 ntBASIC10.08□□□□□ -0.8
ShfQ8CG80 Gm29171-201ENSMUST00000191397 486 ntBASIC10.08□□□□□ -0.8
ShfQ8CG80 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.08□□□□□ -0.8
ShfQ8CG80 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
ShfQ8CG80 Gm8342-201ENSMUST00000209839 757 ntBASIC10.08□□□□□ -0.8
ShfQ8CG80 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.08□□□□□ -0.8
ShfQ8CG80 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.08□□□□□ -0.8
ShfQ8CG80 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.08□□□□□ -0.8
ShfQ8CG80 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
ShfQ8CG80 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.08□□□□□ -0.8
ShfQ8CG80 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
ShfQ8CG80 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
ShfQ8CG80 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
ShfQ8CG80 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
ShfQ8CG80 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
ShfQ8CG80 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
ShfQ8CG80 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
ShfQ8CG80 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
ShfQ8CG80 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
ShfQ8CG80 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.08□□□□□ -0.8
ShfQ8CG80 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
ShfQ8CG80 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
ShfQ8CG80 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
ShfQ8CG80 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
ShfQ8CG80 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
ShfQ8CG80 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.07□□□□□ -0.8
ShfQ8CG80 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.07□□□□□ -0.8
ShfQ8CG80 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.07□□□□□ -0.8
ShfQ8CG80 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.07□□□□□ -0.8
ShfQ8CG80 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
ShfQ8CG80 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
ShfQ8CG80 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.07□□□□□ -0.8
ShfQ8CG80 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Gm25148-201ENSMUST00000104611 123 ntBASIC10.07□□□□□ -0.8
ShfQ8CG80 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.07□□□□□ -0.8
ShfQ8CG80 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
ShfQ8CG80 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.07□□□□□ -0.8
ShfQ8CG80 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.07□□□□□ -0.8
ShfQ8CG80 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.07□□□□□ -0.8
ShfQ8CG80 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
ShfQ8CG80 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
ShfQ8CG80 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.07□□□□□ -0.8
ShfQ8CG80 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.07□□□□□ -0.8
ShfQ8CG80 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
ShfQ8CG80 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
ShfQ8CG80 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms