Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim52Q8CDV4 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.91□□□□□ -0.18
Trim52Q8CDV4 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.91□□□□□ -0.18
Trim52Q8CDV4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim52Q8CDV4 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim52Q8CDV4 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim52Q8CDV4 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim52Q8CDV4 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.91□□□□□ -0.18
Trim52Q8CDV4 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Gm22937-201ENSMUST00000103954 131 ntBASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Gm16167-201ENSMUST00000160428 1065 ntBASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Gm18801-201ENSMUST00000186616 536 ntBASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 AC140375.1-201ENSMUST00000225421 694 ntBASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim52Q8CDV4 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trim52Q8CDV4 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trim52Q8CDV4 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trim52Q8CDV4 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Trim52Q8CDV4 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trim52Q8CDV4 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Trim52Q8CDV4 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Gm26119-201ENSMUST00000175601 104 ntBASIC13.89□□□□□ -0.19
Trim52Q8CDV4 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Mir6923-201ENSMUST00000184592 72 ntBASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Gm43667-201ENSMUST00000198616 1095 ntBASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Gm43778-201ENSMUST00000199438 199 ntBASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Gm44552-201ENSMUST00000205458 1247 ntBASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC13.89□□□□□ -0.19
Trim52Q8CDV4 AC134793.1-202ENSMUST00000227444 803 ntBASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim52Q8CDV4 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim52Q8CDV4 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.88□□□□□ -0.19
Trim52Q8CDV4 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms