Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc38Q8CDN8 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc38Q8CDN8 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc38Q8CDN8 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc38Q8CDN8 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc38Q8CDN8 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc38Q8CDN8 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc38Q8CDN8 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc38Q8CDN8 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc38Q8CDN8 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc38Q8CDN8 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc38Q8CDN8 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc38Q8CDN8 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Gm9540-201ENSMUST00000188230 478 ntBASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Gm4857-201ENSMUST00000192718 785 ntBASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Gm43438-201ENSMUST00000198133 379 ntBASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc38Q8CDN8 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Gm13035-201ENSMUST00000117496 342 ntBASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Gm15374-201ENSMUST00000119313 844 ntBASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Gm15595-201ENSMUST00000120840 961 ntBASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Gm29499-201ENSMUST00000189151 486 ntBASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Gm28329-201ENSMUST00000191208 689 ntBASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Gm29171-201ENSMUST00000191397 486 ntBASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Gm45856-201ENSMUST00000212752 416 ntBASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Gm43014-201ENSMUST00000198568 2443 ntBASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Gm44745-201ENSMUST00000206563 2723 ntBASIC12.61□□□□□ -0.39
Ccdc38Q8CDN8 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc38Q8CDN8 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms