Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc87Q8CDL9 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Ccdc87Q8CDL9 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc87Q8CDL9 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc87Q8CDL9 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc87Q8CDL9 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc87Q8CDL9 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc87Q8CDL9 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc87Q8CDL9 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc87Q8CDL9 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Gm23200-201ENSMUST00000104379 132 ntBASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Mir7677-201ENSMUST00000184226 67 ntBASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Gm38117-201ENSMUST00000194653 939 ntBASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Gm18038-201ENSMUST00000197900 485 ntBASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ccdc87Q8CDL9 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Gm27552-201ENSMUST00000183351 62 ntBASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Gm27844-201ENSMUST00000183613 62 ntBASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Igkv2-116-201ENSMUST00000199327 362 ntBASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Gm44487-201ENSMUST00000205145 325 ntBASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc87Q8CDL9 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Gm13615-201ENSMUST00000120242 1612 ntBASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Gm38271-201ENSMUST00000192296 1603 ntBASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc87Q8CDL9 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms