Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm16071-201ENSMUST00000119589 793 ntBASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm4310-201ENSMUST00000177847 889 ntBASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Mir8115-201ENSMUST00000184992 119 ntBASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm28937-201ENSMUST00000185413 695 ntBASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm29400-201ENSMUST00000187208 695 ntBASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm28662-201ENSMUST00000188446 695 ntBASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm28251-201ENSMUST00000188835 695 ntBASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm17826-201ENSMUST00000189720 798 ntBASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm37318-201ENSMUST00000194325 695 ntBASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm38017-201ENSMUST00000194768 695 ntBASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm37287-201ENSMUST00000195449 695 ntBASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm37793-201ENSMUST00000195548 695 ntBASIC13.2□□□□□ -0.3
Vps53Q8CCB4 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm3793-201ENSMUST00000204973 672 ntBASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm18065-201ENSMUST00000221395 526 ntBASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm43860-201ENSMUST00000201742 2705 ntBASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps53Q8CCB4 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Gm4654-201ENSMUST00000183305 982 ntBASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Mir8093-201ENSMUST00000185043 137 ntBASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Gm38117-201ENSMUST00000194653 939 ntBASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Gm43520-201ENSMUST00000197996 164 ntBASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Gm2875-201ENSMUST00000211333 360 ntBASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.19□□□□□ -0.3
Vps53Q8CCB4 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.19□□□□□ -0.3
Vps53Q8CCB4 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.19□□□□□ -0.3
Vps53Q8CCB4 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.19□□□□□ -0.3
Vps53Q8CCB4 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms