Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim9Q8C7M3 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim9Q8C7M3 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim9Q8C7M3 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Trim9Q8C7M3 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim9Q8C7M3 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim9Q8C7M3 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.46□□□□□ -0.42
Trim9Q8C7M3 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim9Q8C7M3 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim9Q8C7M3 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim9Q8C7M3 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim9Q8C7M3 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim9Q8C7M3 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim9Q8C7M3 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim9Q8C7M3 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Gm15432-201ENSMUST00000121106 195 ntBASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Gm20426-201ENSMUST00000173657 440 ntBASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Mir7051-201ENSMUST00000184167 73 ntBASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Gm5468-202ENSMUST00000227851 682 ntBASIC12.45□□□□□ -0.42
Trim9Q8C7M3 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 BC043934-202ENSMUST00000185694 2356 ntBASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.45□□□□□ -0.42
Trim9Q8C7M3 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim9Q8C7M3 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms