Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Gm5472-201ENSMUST00000178604 1678 ntBASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 AC167565.1-201ENSMUST00000226980 1833 ntBASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Gm38349-201ENSMUST00000195732 462 ntBASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Gm9619-201ENSMUST00000211587 762 ntBASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col16a1Q8BLX7 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Gm25514-201ENSMUST00000083860 135 ntBASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col16a1Q8BLX7 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Col16a1Q8BLX7 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Gm8684-201ENSMUST00000195078 1564 ntBASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Gm6238-201ENSMUST00000120999 465 ntBASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Gm4705-201ENSMUST00000177415 354 ntBASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Mipep-ps-201ENSMUST00000177439 291 ntBASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Gm27833-201ENSMUST00000184285 124 ntBASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 AC154585.1-201ENSMUST00000218917 997 ntBASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Gm42971-201ENSMUST00000199228 2079 ntBASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Col16a1Q8BLX7 Gfra2-203ENSMUST00000227697 1323 ntBASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Gm37931-201ENSMUST00000194686 2866 ntBASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 CT009713.2-201ENSMUST00000225532 1149 ntBASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Gm9701-201ENSMUST00000077976 427 ntBASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Gm43931-201ENSMUST00000204817 2870 ntBASIC14.57□□□□□ -0.08
Col16a1Q8BLX7 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms