Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim6Q8BGE7 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim6Q8BGE7 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim6Q8BGE7 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC12.02□□□□□ -0.48
Trim6Q8BGE7 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.02□□□□□ -0.48
Trim6Q8BGE7 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim6Q8BGE7 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim6Q8BGE7 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim6Q8BGE7 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim6Q8BGE7 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trim6Q8BGE7 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trim6Q8BGE7 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.02□□□□□ -0.48
Trim6Q8BGE7 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Gm38117-201ENSMUST00000194653 939 ntBASIC12.02□□□□□ -0.49
Trim6Q8BGE7 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Gm4157-201ENSMUST00000211647 679 ntBASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim6Q8BGE7 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Gm26047-201ENSMUST00000157308 113 ntBASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Gm26047-202ENSMUST00000198840 115 ntBASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Gm6334-201ENSMUST00000207083 228 ntBASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms