Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Gm25668-201ENSMUST00000157700 129 ntBASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Gm45113-201ENSMUST00000207518 165 ntBASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.37□□□□□ -0.75
Smarcd3Q6P9Z1 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Smarcd3Q6P9Z1 Gm12857-201ENSMUST00000117678 592 ntBASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms