Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Sox17Q61473 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Sox17Q61473 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Sox17Q61473 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Sox17Q61473 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.55□□□□□ -0.72
Sox17Q61473 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.55□□□□□ -0.72
Sox17Q61473 Gm11930-201ENSMUST00000117788 190 ntBASIC10.55□□□□□ -0.72
Sox17Q61473 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.55□□□□□ -0.72
Sox17Q61473 Gm7150-201ENSMUST00000122032 981 ntBASIC10.55□□□□□ -0.72
Sox17Q61473 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.55□□□□□ -0.72
Sox17Q61473 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.55□□□□□ -0.72
Sox17Q61473 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.55□□□□□ -0.72
Sox17Q61473 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.55□□□□□ -0.72
Sox17Q61473 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.55□□□□□ -0.72
Sox17Q61473 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Gm29396-201ENSMUST00000185659 716 ntBASIC10.55□□□□□ -0.72
Sox17Q61473 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.55□□□□□ -0.72
Sox17Q61473 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.55□□□□□ -0.72
Sox17Q61473 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.55□□□□□ -0.72
Sox17Q61473 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Gm2553-201ENSMUST00000215986 605 ntBASIC10.55□□□□□ -0.72
Sox17Q61473 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Sox17Q61473 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sox17Q61473 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.55□□□□□ -0.72
Sox17Q61473 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sox17Q61473 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.55□□□□□ -0.72
Sox17Q61473 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Sox17Q61473 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Sox17Q61473 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.54□□□□□ -0.72
Sox17Q61473 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Sox17Q61473 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Sox17Q61473 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Sox17Q61473 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Spata33-207ENSMUST00000212760 4074 ntBASIC10.54□□□□□ -0.72
Sox17Q61473 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Sox17Q61473 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.54□□□□□ -0.72
Sox17Q61473 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.54□□□□□ -0.72
Sox17Q61473 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.54□□□□□ -0.72
Sox17Q61473 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.54□□□□□ -0.72
Sox17Q61473 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Sox17Q61473 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.54□□□□□ -0.72
Sox17Q61473 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.54□□□□□ -0.72
Sox17Q61473 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Gm9353-201ENSMUST00000200472 604 ntBASIC10.54□□□□□ -0.72
Sox17Q61473 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Sox17Q61473 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.54□□□□□ -0.72
Sox17Q61473 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Sox17Q61473 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sox17Q61473 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sox17Q61473 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sox17Q61473 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox17Q61473 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms