Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.49□□□□□ -0.41
Ift88Q61371 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ift88Q61371 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.49□□□□□ -0.41
Ift88Q61371 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC12.49□□□□□ -0.41
Ift88Q61371 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ift88Q61371 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Ift88Q61371 Gm14130-201ENSMUST00000118417 987 ntBASIC12.49□□□□□ -0.41
Ift88Q61371 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Gm15617-201ENSMUST00000118973 771 ntBASIC12.49□□□□□ -0.41
Ift88Q61371 Gm12196-201ENSMUST00000120954 262 ntBASIC12.49□□□□□ -0.41
Ift88Q61371 Gm22846-201ENSMUST00000157706 270 ntBASIC12.49□□□□□ -0.41
Ift88Q61371 Olfml3-204ENSMUST00000169286 874 ntBASIC12.49□□□□□ -0.41
Ift88Q61371 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.49□□□□□ -0.41
Ift88Q61371 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.49□□□□□ -0.41
Ift88Q61371 Gm7003-201ENSMUST00000195089 312 ntBASIC12.49□□□□□ -0.41
Ift88Q61371 Gm2965-201ENSMUST00000198365 343 ntBASIC12.49□□□□□ -0.41
Ift88Q61371 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.49□□□□□ -0.41
Ift88Q61371 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Gm6108-201ENSMUST00000208365 367 ntBASIC12.49□□□□□ -0.41
Ift88Q61371 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.49□□□□□ -0.41
Ift88Q61371 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ift88Q61371 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Ift88Q61371 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.48□□□□□ -0.41
Ift88Q61371 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.48□□□□□ -0.41
Ift88Q61371 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.48□□□□□ -0.41
Ift88Q61371 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.48□□□□□ -0.41
Ift88Q61371 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ift88Q61371 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ift88Q61371 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.48□□□□□ -0.41
Ift88Q61371 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ift88Q61371 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Ift88Q61371 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.48□□□□□ -0.41
Ift88Q61371 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ift88Q61371 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.48□□□□□ -0.41
Ift88Q61371 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
Ift88Q61371 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.48□□□□□ -0.41
Ift88Q61371 Gm6082-201ENSMUST00000215204 454 ntBASIC12.48□□□□□ -0.41
Ift88Q61371 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.48□□□□□ -0.41
Ift88Q61371 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.48□□□□□ -0.41
Ift88Q61371 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.48□□□□□ -0.41
Ift88Q61371 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.48□□□□□ -0.41
Ift88Q61371 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.48□□□□□ -0.41
Ift88Q61371 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ift88Q61371 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.48□□□□□ -0.41
Ift88Q61371 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Ift88Q61371 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms