Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 CT009495.1-201ENSMUST00000224221 862 ntBASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Gm12628-201ENSMUST00000122193 382 ntBASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Gm19246-201ENSMUST00000173599 255 ntBASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Gm18776-201ENSMUST00000188833 654 ntBASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Gm43452-201ENSMUST00000201873 991 ntBASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Gm17917-201ENSMUST00000218561 953 ntBASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Gm18514-201ENSMUST00000218980 436 ntBASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 AC154305.2-201ENSMUST00000225813 901 ntBASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rc3h1Q4VGL6 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Snord17-201ENSMUST00000104526 238 ntBASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm14807-201ENSMUST00000116640 983 ntBASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm13284-201ENSMUST00000121020 547 ntBASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm25343-201ENSMUST00000157460 107 ntBASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms