Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Gm8459-201ENSMUST00000162504 760 ntBASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Gm17192-201ENSMUST00000169031 511 ntBASIC14.07□□□□□ -0.16
Usp48Q3V0C5 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.07□□□□□ -0.16
Usp48Q3V0C5 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp48Q3V0C5 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Gm11996-201ENSMUST00000117538 915 ntBASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Gm5555-201ENSMUST00000120352 1111 ntBASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Gm15620-201ENSMUST00000122949 270 ntBASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Gm25677-201ENSMUST00000174983 72 ntBASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Gm21156-201ENSMUST00000189693 869 ntBASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Gm42511-201ENSMUST00000196160 234 ntBASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Gm6450-201ENSMUST00000200896 574 ntBASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Gm10263-201ENSMUST00000085163 300 ntBASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Gm6831-202ENSMUST00000213025 1673 ntBASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Gm18798-201ENSMUST00000187264 1700 ntBASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Usp48Q3V0C5 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Gm11500-201ENSMUST00000118237 601 ntBASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Gm13445-201ENSMUST00000121664 307 ntBASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Gm5706-201ENSMUST00000181525 993 ntBASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Gm43671-201ENSMUST00000200422 433 ntBASIC14.05□□□□□ -0.16
Usp48Q3V0C5 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp48Q3V0C5 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp48Q3V0C5 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms