Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Gm16166-201ENSMUST00000118291 787 ntBASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Gm16219-201ENSMUST00000120096 274 ntBASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Gm9645-201ENSMUST00000197131 792 ntBASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upf3bQ3ULL6 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Gm25076-201ENSMUST00000104098 132 ntBASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Gm23694-201ENSMUST00000179335 110 ntBASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Gm3551-201ENSMUST00000190750 664 ntBASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Gm43947-201ENSMUST00000203019 959 ntBASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upf3bQ3ULL6 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upf3bQ3ULL6 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upf3bQ3ULL6 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upf3bQ3ULL6 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upf3bQ3ULL6 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.09□□□□□ -0.47
Upf3bQ3ULL6 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Upf3bQ3ULL6 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upf3bQ3ULL6 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upf3bQ3ULL6 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.09□□□□□ -0.47
Upf3bQ3ULL6 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Upf3bQ3ULL6 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms