Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Gm42858-201ENSMUST00000202512 1704 ntBASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Gm42467-201ENSMUST00000202954 1447 ntBASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Gm12047-201ENSMUST00000117561 944 ntBASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Gm12377-201ENSMUST00000118656 252 ntBASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 CR974487.1-201ENSMUST00000220984 413 ntBASIC10.38□□□□□ -0.75
Spg11Q3UHA3 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Gm11951-201ENSMUST00000116005 431 ntBASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Gm15539-201ENSMUST00000118452 566 ntBASIC10.38□□□□□ -0.75
Spg11Q3UHA3 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Gm16288-201ENSMUST00000137940 367 ntBASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Gm5311-201ENSMUST00000203518 709 ntBASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Olfr1511-201ENSMUST00000078171 957 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Gpr151-201ENSMUST00000054738 1633 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Spg11Q3UHA3 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Grk6-205ENSMUST00000224653 2976 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Fhl3-202ENSMUST00000106199 1139 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gm27833-201ENSMUST00000184285 124 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gm44716-201ENSMUST00000209007 710 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 AC155293.1-201ENSMUST00000219793 1026 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 AC156561.1-201ENSMUST00000224774 233 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 AC122356.2-201ENSMUST00000226962 820 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms