Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm26286-201ENSMUST00000104166 134 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm11700-201ENSMUST00000119409 403 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm5616-201ENSMUST00000165252 384 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm8741-201ENSMUST00000174736 384 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm29615-201ENSMUST00000185371 697 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm28224-201ENSMUST00000186078 697 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm29001-201ENSMUST00000186177 697 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm28292-201ENSMUST00000186593 697 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm28101-201ENSMUST00000187608 697 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm29076-201ENSMUST00000187689 697 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm28302-201ENSMUST00000187931 697 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm28646-201ENSMUST00000188220 697 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm28205-201ENSMUST00000189177 697 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm29032-201ENSMUST00000189797 697 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm28695-201ENSMUST00000190300 697 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm4857-201ENSMUST00000192718 785 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm37448-201ENSMUST00000192795 697 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 AY036118-201ENSMUST00000200021 923 ntBASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Fndc4Q3TR08 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.65□□□□□ -0.87
Fndc4Q3TR08 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Fndc4Q3TR08 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Fndc4Q3TR08 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Fndc4Q3TR08 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Fndc4Q3TR08 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Fndc4Q3TR08 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Fndc4Q3TR08 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.65□□□□□ -0.87
Fndc4Q3TR08 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Erich3-203ENSMUST00000189969 3460 ntBASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Gm11960-201ENSMUST00000122068 925 ntBASIC9.64□□□□□ -0.87
Fndc4Q3TR08 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Gm38314-201ENSMUST00000195709 625 ntBASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Gm44262-201ENSMUST00000204969 372 ntBASIC9.64□□□□□ -0.87
Fndc4Q3TR08 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Gm45433-201ENSMUST00000209386 247 ntBASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Gm17827-201ENSMUST00000211825 742 ntBASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Fndc4Q3TR08 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms