Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Gm15549-201ENSMUST00000121595 622 ntBASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Gm37597-201ENSMUST00000191853 382 ntBASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Gm9899-201ENSMUST00000065519 555 ntBASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Gm21811-201ENSMUST00000096485 930 ntBASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Gm4294-201ENSMUST00000105169 614 ntBASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Gm15329-201ENSMUST00000121408 155 ntBASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Mir1896-201ENSMUST00000122641 81 ntBASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Gm5733-201ENSMUST00000190232 939 ntBASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Gm7504-201ENSMUST00000201449 424 ntBASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Gm5996-201ENSMUST00000211110 718 ntBASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cul4aQ3TCH7 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms