Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.88□□□□□ -0.67
Hoxc4Q08624 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.88□□□□□ -0.67
Hoxc4Q08624 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Gm6158-201ENSMUST00000109467 904 ntBASIC10.88□□□□□ -0.67
Hoxc4Q08624 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Gm14234-201ENSMUST00000119539 845 ntBASIC10.88□□□□□ -0.67
Hoxc4Q08624 Gm13019-201ENSMUST00000120000 276 ntBASIC10.88□□□□□ -0.67
Hoxc4Q08624 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Hoxc4Q08624 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.88□□□□□ -0.67
Hoxc4Q08624 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.88□□□□□ -0.67
Hoxc4Q08624 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC10.88□□□□□ -0.67
Hoxc4Q08624 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Gm2594-201ENSMUST00000214774 742 ntBASIC10.88□□□□□ -0.67
Hoxc4Q08624 Gm9111-201ENSMUST00000219394 709 ntBASIC10.88□□□□□ -0.67
Hoxc4Q08624 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc4Q08624 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.88□□□□□ -0.67
Hoxc4Q08624 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.88□□□□□ -0.67
Hoxc4Q08624 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.88□□□□□ -0.67
Hoxc4Q08624 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.88□□□□□ -0.67
Hoxc4Q08624 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hoxc4Q08624 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Gm5739-201ENSMUST00000208601 1703 ntBASIC10.87□□□□□ -0.67
Hoxc4Q08624 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Gm25880-201ENSMUST00000104331 132 ntBASIC10.87□□□□□ -0.67
Hoxc4Q08624 Gm25562-201ENSMUST00000104608 133 ntBASIC10.87□□□□□ -0.67
Hoxc4Q08624 Gm5529-201ENSMUST00000165691 891 ntBASIC10.87□□□□□ -0.67
Hoxc4Q08624 Gm24809-201ENSMUST00000175318 271 ntBASIC10.87□□□□□ -0.67
Hoxc4Q08624 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.87□□□□□ -0.67
Hoxc4Q08624 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.87□□□□□ -0.67
Hoxc4Q08624 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc4Q08624 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hoxc4Q08624 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxc4Q08624 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxc4Q08624 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.86□□□□□ -0.67
Hoxc4Q08624 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxc4Q08624 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.86□□□□□ -0.67
Hoxc4Q08624 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxc4Q08624 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxc4Q08624 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxc4Q08624 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.86□□□□□ -0.67
Hoxc4Q08624 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxc4Q08624 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxc4Q08624 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxc4Q08624 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.86□□□□□ -0.67
Hoxc4Q08624 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxc4Q08624 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxc4Q08624 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hoxc4Q08624 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms