Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GabpaQ00422 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.82□□□□□ -0.36
GabpaQ00422 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
GabpaQ00422 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.82□□□□□ -0.36
GabpaQ00422 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.82□□□□□ -0.36
GabpaQ00422 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
GabpaQ00422 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
GabpaQ00422 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Snord17-201ENSMUST00000104526 238 ntBASIC12.82□□□□□ -0.36
GabpaQ00422 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
GabpaQ00422 Gm4917-201ENSMUST00000121452 650 ntBASIC12.82□□□□□ -0.36
GabpaQ00422 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.82□□□□□ -0.36
GabpaQ00422 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC12.82□□□□□ -0.36
GabpaQ00422 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Gm25830-201ENSMUST00000158923 132 ntBASIC12.82□□□□□ -0.36
GabpaQ00422 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.82□□□□□ -0.36
GabpaQ00422 Gm37365-201ENSMUST00000193109 409 ntBASIC12.82□□□□□ -0.36
GabpaQ00422 Gm44216-201ENSMUST00000203942 157 ntBASIC12.82□□□□□ -0.36
GabpaQ00422 Gm6423-201ENSMUST00000204315 934 ntBASIC12.82□□□□□ -0.36
GabpaQ00422 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.82□□□□□ -0.36
GabpaQ00422 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.82□□□□□ -0.36
GabpaQ00422 Gm26670-202ENSMUST00000226862 340 ntBASIC12.82□□□□□ -0.36
GabpaQ00422 Gm10254-201ENSMUST00000052888 867 ntBASIC12.82□□□□□ -0.36
GabpaQ00422 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
GabpaQ00422 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
GabpaQ00422 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.82□□□□□ -0.36
GabpaQ00422 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
GabpaQ00422 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
GabpaQ00422 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
GabpaQ00422 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
GabpaQ00422 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
GabpaQ00422 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.81□□□□□ -0.36
GabpaQ00422 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.81□□□□□ -0.36
GabpaQ00422 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
GabpaQ00422 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.81□□□□□ -0.36
GabpaQ00422 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.81□□□□□ -0.36
GabpaQ00422 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
GabpaQ00422 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.81□□□□□ -0.36
GabpaQ00422 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
GabpaQ00422 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.81□□□□□ -0.36
GabpaQ00422 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.81□□□□□ -0.36
GabpaQ00422 Gm2594-201ENSMUST00000214774 742 ntBASIC12.81□□□□□ -0.36
GabpaQ00422 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.81□□□□□ -0.36
GabpaQ00422 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
GabpaQ00422 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
GabpaQ00422 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
GabpaQ00422 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
GabpaQ00422 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.81□□□□□ -0.36
GabpaQ00422 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.81□□□□□ -0.36
GabpaQ00422 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
GabpaQ00422 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GabpaQ00422 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.8□□□□□ -0.36
GabpaQ00422 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
GabpaQ00422 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms