Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smarcc1P97496 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smarcc1P97496 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm15617-201ENSMUST00000118973 771 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm23647-201ENSMUST00000175042 109 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 Rn5s-201ENSMUST00000177555 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s108-201ENSMUST00000177575 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s121-201ENSMUST00000177589 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s146-201ENSMUST00000177889 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm22109-201ENSMUST00000177995 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm22291-201ENSMUST00000178027 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s141-201ENSMUST00000178066 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm23284-201ENSMUST00000178069 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s100-201ENSMUST00000178106 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s111-201ENSMUST00000178203 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s105-201ENSMUST00000178499 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s149-201ENSMUST00000178520 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s103-201ENSMUST00000178755 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s123-201ENSMUST00000178804 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s142-201ENSMUST00000178820 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s144-201ENSMUST00000178859 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s139-201ENSMUST00000178975 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s134-201ENSMUST00000178983 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s136-201ENSMUST00000179080 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm25018-201ENSMUST00000179081 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s104-201ENSMUST00000179107 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s113-201ENSMUST00000179143 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s133-201ENSMUST00000179275 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s117-201ENSMUST00000179431 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm25212-201ENSMUST00000179432 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s138-201ENSMUST00000179476 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s122-201ENSMUST00000179500 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s143-201ENSMUST00000179542 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s107-201ENSMUST00000179704 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm26391-201ENSMUST00000179843 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s110-201ENSMUST00000179995 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s128-201ENSMUST00000180096 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 n-R5s124-201ENSMUST00000180334 119 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm27440-201ENSMUST00000184785 107 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm8234-201ENSMUST00000198523 1107 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm18010-201ENSMUST00000203553 202 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm26782-203ENSMUST00000227103 751 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 AC156790.2-201ENSMUST00000227115 568 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smarcc1P97496 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm24089-201ENSMUST00000093696 109 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smarcc1P97496 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Smarcc1P97496 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm12912-201ENSMUST00000121596 1381 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Gm44740-201ENSMUST00000205603 1614 ntBASIC14.18□□□□□ -0.14
Smarcc1P97496 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcc1P97496 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcc1P97496 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcc1P97496 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Smarcc1P97496 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.17□□□□□ -0.14
Smarcc1P97496 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Smarcc1P97496 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcc1P97496 Gm12418-201ENSMUST00000118116 942 ntBASIC14.17□□□□□ -0.14
Smarcc1P97496 Gm5395-201ENSMUST00000121650 915 ntBASIC14.17□□□□□ -0.14
Smarcc1P97496 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC14.17□□□□□ -0.14
Smarcc1P97496 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC14.17□□□□□ -0.14
Smarcc1P97496 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC14.17□□□□□ -0.14
Smarcc1P97496 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms