Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cacna1aP97445 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.49□□□□□ -0.73
Cacna1aP97445 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.49□□□□□ -0.73
Cacna1aP97445 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Cacna1aP97445 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cacna1aP97445 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cacna1aP97445 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Gm22344-201ENSMUST00000122642 278 ntBASIC10.49□□□□□ -0.73
Cacna1aP97445 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC10.49□□□□□ -0.73
Cacna1aP97445 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Cacna1aP97445 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.49□□□□□ -0.73
Cacna1aP97445 Ighv1-70-201ENSMUST00000196509 351 ntBASIC10.49□□□□□ -0.73
Cacna1aP97445 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC10.49□□□□□ -0.73
Cacna1aP97445 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC10.49□□□□□ -0.73
Cacna1aP97445 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cacna1aP97445 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Gm8968-201ENSMUST00000199133 1303 ntBASIC10.49□□□□□ -0.73
Cacna1aP97445 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.49□□□□□ -0.73
Cacna1aP97445 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cacna1aP97445 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Cacna1aP97445 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cacna1aP97445 Gm23595-201ENSMUST00000104306 130 ntBASIC10.48□□□□□ -0.73
Cacna1aP97445 Mir453-201ENSMUST00000104732 82 ntBASIC10.48□□□□□ -0.73
Cacna1aP97445 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC10.48□□□□□ -0.73
Cacna1aP97445 Gm15746-201ENSMUST00000120684 1027 ntBASIC10.48□□□□□ -0.73
Cacna1aP97445 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.48□□□□□ -0.73
Cacna1aP97445 Gm24294-201ENSMUST00000158295 277 ntBASIC10.48□□□□□ -0.73
Cacna1aP97445 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.48□□□□□ -0.73
Cacna1aP97445 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC10.48□□□□□ -0.73
Cacna1aP97445 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 AC174797.2-201ENSMUST00000225835 165 ntBASIC10.48□□□□□ -0.73
Cacna1aP97445 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cacna1aP97445 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.48□□□□□ -0.73
Cacna1aP97445 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.48□□□□□ -0.73
Cacna1aP97445 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.48□□□□□ -0.73
Cacna1aP97445 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.48□□□□□ -0.73
Cacna1aP97445 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Cacna1aP97445 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.48□□□□□ -0.73
Cacna1aP97445 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC10.48□□□□□ -0.73
Cacna1aP97445 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.48□□□□□ -0.73
Cacna1aP97445 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.48□□□□□ -0.73
Cacna1aP97445 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.48□□□□□ -0.73
Cacna1aP97445 Gm27826-201ENSMUST00000175282 255 ntBASIC10.48□□□□□ -0.73
Cacna1aP97445 Kif4-ps-202ENSMUST00000185083 652 ntBASIC10.48□□□□□ -0.73
Cacna1aP97445 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.48□□□□□ -0.73
Cacna1aP97445 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.48□□□□□ -0.73
Cacna1aP97445 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC10.48□□□□□ -0.73
Cacna1aP97445 Gm18041-201ENSMUST00000218210 618 ntBASIC10.48□□□□□ -0.73
Cacna1aP97445 AC169511.1-201ENSMUST00000227639 995 ntBASIC10.48□□□□□ -0.73
Cacna1aP97445 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cacna1aP97445 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms