Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
SgcaP82350 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SgcaP82350 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
SgcaP82350 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.49□□□□□ -0.89
SgcaP82350 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
SgcaP82350 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.48□□□□□ -0.89
SgcaP82350 Ccdc116-202ENSMUST00000115709 1900 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.48□□□□□ -0.89
SgcaP82350 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.48□□□□□ -0.89
SgcaP82350 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC9.48□□□□□ -0.89
SgcaP82350 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Gm10434-201ENSMUST00000101158 471 ntBASIC9.48□□□□□ -0.89
SgcaP82350 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Gm24845-201ENSMUST00000158034 109 ntBASIC9.48□□□□□ -0.89
SgcaP82350 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
SgcaP82350 Gm29127-201ENSMUST00000188304 517 ntBASIC9.48□□□□□ -0.89
SgcaP82350 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC9.48□□□□□ -0.89
SgcaP82350 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.48□□□□□ -0.89
SgcaP82350 AC140375.2-201ENSMUST00000225283 584 ntBASIC9.48□□□□□ -0.89
SgcaP82350 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
SgcaP82350 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
SgcaP82350 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
SgcaP82350 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
SgcaP82350 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
SgcaP82350 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.48□□□□□ -0.89
SgcaP82350 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.48□□□□□ -0.89
SgcaP82350 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Gm12576-201ENSMUST00000135268 3036 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SgcaP82350 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.47□□□□□ -0.89
SgcaP82350 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.47□□□□□ -0.89
SgcaP82350 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC9.47□□□□□ -0.89
SgcaP82350 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.47□□□□□ -0.89
SgcaP82350 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.47□□□□□ -0.89
SgcaP82350 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Gm42826-201ENSMUST00000197548 2639 ntBASIC9.47□□□□□ -0.89
SgcaP82350 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
SgcaP82350 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
SgcaP82350 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC9.47□□□□□ -0.89
SgcaP82350 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
SgcaP82350 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.47□□□□□ -0.89
SgcaP82350 Gm19963-201ENSMUST00000208413 1255 ntBASIC9.47□□□□□ -0.89
SgcaP82350 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
SgcaP82350 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 AC154252.2-201ENSMUST00000223593 767 ntBASIC9.47□□□□□ -0.89
SgcaP82350 AC122459.1-201ENSMUST00000228373 885 ntBASIC9.47□□□□□ -0.89
SgcaP82350 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
SgcaP82350 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC9.47□□□□□ -0.89
SgcaP82350 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
SgcaP82350 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Gm4366-201ENSMUST00000201488 1342 ntBASIC9.47□□□□□ -0.89
SgcaP82350 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SgcaP82350 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms