Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Six5P70178 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.61□□□□□ -0.71
Six5P70178 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.61□□□□□ -0.71
Six5P70178 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Six5P70178 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Six5P70178 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Six5P70178 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.61□□□□□ -0.71
Six5P70178 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Six5P70178 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Six5P70178 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.6□□□□□ -0.71
Six5P70178 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.6□□□□□ -0.71
Six5P70178 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Six5P70178 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Six5P70178 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Six5P70178 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Gm23272-201ENSMUST00000104053 129 ntBASIC10.6□□□□□ -0.71
Six5P70178 Gm25148-201ENSMUST00000104611 123 ntBASIC10.6□□□□□ -0.71
Six5P70178 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Gm8302-201ENSMUST00000119217 852 ntBASIC10.6□□□□□ -0.71
Six5P70178 Gm11956-201ENSMUST00000119525 512 ntBASIC10.6□□□□□ -0.71
Six5P70178 Gm11331-201ENSMUST00000119764 288 ntBASIC10.6□□□□□ -0.71
Six5P70178 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.6□□□□□ -0.71
Six5P70178 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.6□□□□□ -0.71
Six5P70178 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.6□□□□□ -0.71
Six5P70178 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.6□□□□□ -0.71
Six5P70178 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.6□□□□□ -0.71
Six5P70178 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Gm10051-201ENSMUST00000145209 414 ntBASIC10.6□□□□□ -0.71
Six5P70178 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.6□□□□□ -0.71
Six5P70178 Gm37284-201ENSMUST00000193607 539 ntBASIC10.6□□□□□ -0.71
Six5P70178 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.6□□□□□ -0.71
Six5P70178 Gm6439-201ENSMUST00000199849 862 ntBASIC10.6□□□□□ -0.71
Six5P70178 Gm9353-201ENSMUST00000200472 604 ntBASIC10.6□□□□□ -0.71
Six5P70178 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.6□□□□□ -0.71
Six5P70178 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.6□□□□□ -0.71
Six5P70178 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.6□□□□□ -0.71
Six5P70178 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.6□□□□□ -0.71
Six5P70178 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.6□□□□□ -0.71
Six5P70178 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Six5P70178 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Six5P70178 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.6□□□□□ -0.71
Six5P70178 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Six5P70178 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Six5P70178 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.59□□□□□ -0.71
Six5P70178 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.59□□□□□ -0.71
Six5P70178 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Six5P70178 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.59□□□□□ -0.71
Six5P70178 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Six5P70178 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.59□□□□□ -0.71
Six5P70178 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.59□□□□□ -0.71
Six5P70178 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Six5P70178 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Six5P70178 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms