Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.51□□□□□ -0.41
Hmgb1P63158 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Hmgb1P63158 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hmgb1P63158 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hmgb1P63158 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hmgb1P63158 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hmgb1P63158 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.5□□□□□ -0.41
Hmgb1P63158 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.5□□□□□ -0.41
Hmgb1P63158 Gm12501-201ENSMUST00000119163 529 ntBASIC12.5□□□□□ -0.41
Hmgb1P63158 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Gm4482-201ENSMUST00000200876 742 ntBASIC12.5□□□□□ -0.41
Hmgb1P63158 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.5□□□□□ -0.41
Hmgb1P63158 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.5□□□□□ -0.41
Hmgb1P63158 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.5□□□□□ -0.41
Hmgb1P63158 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hmgb1P63158 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hmgb1P63158 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Hmgb1P63158 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hmgb1P63158 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.5□□□□□ -0.41
Hmgb1P63158 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hmgb1P63158 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hmgb1P63158 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hmgb1P63158 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC12.49□□□□□ -0.41
Hmgb1P63158 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.49□□□□□ -0.41
Hmgb1P63158 Gm24891-201ENSMUST00000104391 136 ntBASIC12.49□□□□□ -0.41
Hmgb1P63158 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
Hmgb1P63158 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.49□□□□□ -0.41
Hmgb1P63158 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.49□□□□□ -0.41
Hmgb1P63158 Gm27530-201ENSMUST00000184096 98 ntBASIC12.49□□□□□ -0.41
Hmgb1P63158 Gm29499-201ENSMUST00000189151 486 ntBASIC12.49□□□□□ -0.41
Hmgb1P63158 Gm28329-201ENSMUST00000191208 689 ntBASIC12.49□□□□□ -0.41
Hmgb1P63158 Gm29171-201ENSMUST00000191397 486 ntBASIC12.49□□□□□ -0.41
Hmgb1P63158 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.49□□□□□ -0.41
Hmgb1P63158 Gm42867-201ENSMUST00000202995 469 ntBASIC12.49□□□□□ -0.41
Hmgb1P63158 Gm18212-201ENSMUST00000211678 889 ntBASIC12.49□□□□□ -0.41
Hmgb1P63158 Gm45856-201ENSMUST00000212752 416 ntBASIC12.49□□□□□ -0.41
Hmgb1P63158 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.49□□□□□ -0.41
Hmgb1P63158 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Hmgb1P63158 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.49□□□□□ -0.41
Hmgb1P63158 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Hmgb1P63158 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hmgb1P63158 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgb1P63158 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms