Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm5468-202ENSMUST00000227851 682 ntBASIC10.7□□□□□ -0.7
Nup43P59235 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Nup43P59235 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup43P59235 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.7□□□□□ -0.7
Nup43P59235 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup43P59235 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Nup43P59235 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup43P59235 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup43P59235 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup43P59235 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup43P59235 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup43P59235 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nup43P59235 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Nup43P59235 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.7□□□□□ -0.7
Nup43P59235 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Nup43P59235 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.69□□□□□ -0.7
Nup43P59235 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.69□□□□□ -0.7
Nup43P59235 Gm11246-201ENSMUST00000120880 345 ntBASIC10.69□□□□□ -0.7
Nup43P59235 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.69□□□□□ -0.7
Nup43P59235 Gm22902-201ENSMUST00000158488 302 ntBASIC10.69□□□□□ -0.7
Nup43P59235 Gm17391-201ENSMUST00000171036 126 ntBASIC10.69□□□□□ -0.7
Nup43P59235 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC10.69□□□□□ -0.7
Nup43P59235 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.69□□□□□ -0.7
Nup43P59235 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC10.69□□□□□ -0.7
Nup43P59235 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.69□□□□□ -0.7
Nup43P59235 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.69□□□□□ -0.7
Nup43P59235 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.69□□□□□ -0.7
Nup43P59235 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.69□□□□□ -0.7
Nup43P59235 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nup43P59235 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nup43P59235 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup43P59235 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup43P59235 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nup43P59235 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup43P59235 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup43P59235 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup43P59235 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Nup43P59235 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup43P59235 Gm12463-201ENSMUST00000118271 849 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Gm12616-201ENSMUST00000118594 382 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Gm14942-201ENSMUST00000119642 336 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Gm14363-201ENSMUST00000122304 409 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Nup43P59235 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nup43P59235 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Nup43P59235 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC10.68□□□□□ -0.7
Nup43P59235 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nup43P59235 Gm12624-201ENSMUST00000177615 382 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Gm12621-201ENSMUST00000177760 382 ntBASIC10.68□□□□□ -0.7
Nup43P59235 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Nup43P59235 Gm12615-201ENSMUST00000177970 382 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Gm12622-201ENSMUST00000177975 382 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Gm12627-201ENSMUST00000178412 382 ntBASIC10.68□□□□□ -0.7
Nup43P59235 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Nup43P59235 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Nup43P59235 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Nup43P59235 Gm12625-201ENSMUST00000179122 382 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Gm12614-201ENSMUST00000179586 382 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Gm12613-201ENSMUST00000180323 382 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Mir7051-201ENSMUST00000184167 73 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Gm27910-201ENSMUST00000185004 107 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Gm7467-201ENSMUST00000185173 652 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Gm6546-201ENSMUST00000192096 766 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup43P59235 Gm37299-201ENSMUST00000193951 826 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Gm44980-201ENSMUST00000205826 314 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.68□□□□□ -0.7
Nup43P59235 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup43P59235 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nup43P59235 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup43P59235 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup43P59235 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Nup43P59235 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup43P59235 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nup43P59235 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.68□□□□□ -0.7
Nup43P59235 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nup43P59235 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Nup43P59235 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.68□□□□□ -0.7
Nup43P59235 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms