Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Gm5302-201ENSMUST00000202130 796 ntBASIC10.81□□□□□ -0.68
Cdkn2bP55271 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.81□□□□□ -0.68
Cdkn2bP55271 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cdkn2bP55271 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.8□□□□□ -0.68
Cdkn2bP55271 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Gm24074-201ENSMUST00000158178 260 ntBASIC10.8□□□□□ -0.68
Cdkn2bP55271 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.8□□□□□ -0.68
Cdkn2bP55271 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Gm8100-201ENSMUST00000182906 988 ntBASIC10.8□□□□□ -0.68
Cdkn2bP55271 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Gm37301-201ENSMUST00000195412 568 ntBASIC10.8□□□□□ -0.68
Cdkn2bP55271 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Gm3961-201ENSMUST00000204425 994 ntBASIC10.8□□□□□ -0.68
Cdkn2bP55271 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.8□□□□□ -0.68
Cdkn2bP55271 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.8□□□□□ -0.68
Cdkn2bP55271 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.8□□□□□ -0.68
Cdkn2bP55271 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdkn2bP55271 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Cdkn2bP55271 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cdkn2bP55271 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.79□□□□□ -0.68
Cdkn2bP55271 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.79□□□□□ -0.68
Cdkn2bP55271 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdkn2bP55271 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cdkn2bP55271 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.79□□□□□ -0.68
Cdkn2bP55271 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cdkn2bP55271 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdkn2bP55271 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdkn2bP55271 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdkn2bP55271 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdkn2bP55271 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cdkn2bP55271 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdkn2bP55271 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdkn2bP55271 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdkn2bP55271 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdkn2bP55271 Gm13916-201ENSMUST00000117368 628 ntBASIC10.79□□□□□ -0.68
Cdkn2bP55271 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.79□□□□□ -0.68
Cdkn2bP55271 Gm14723-201ENSMUST00000118686 215 ntBASIC10.79□□□□□ -0.68
Cdkn2bP55271 Gm13263-201ENSMUST00000121271 838 ntBASIC10.79□□□□□ -0.68
Cdkn2bP55271 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cdkn2bP55271 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cdkn2bP55271 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms