Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm11942-201ENSMUST00000180255 345 ntBASIC14.29□□□□□ -0.12
Msh6P54276 Gm19013-201ENSMUST00000183895 1222 ntBASIC14.29□□□□□ -0.12
Msh6P54276 Gm19014-201ENSMUST00000184828 1189 ntBASIC14.29□□□□□ -0.12
Msh6P54276 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC14.29□□□□□ -0.12
Msh6P54276 Gm37197-201ENSMUST00000195607 401 ntBASIC14.29□□□□□ -0.12
Msh6P54276 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Msh6P54276 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Msh6P54276 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Msh6P54276 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Msh6P54276 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Msh6P54276 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC14.28□□□□□ -0.12
Msh6P54276 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Gm5822-201ENSMUST00000161562 1378 ntBASIC14.28□□□□□ -0.12
Msh6P54276 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC14.28□□□□□ -0.12
Msh6P54276 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Gm22937-201ENSMUST00000103954 131 ntBASIC14.28□□□□□ -0.12
Msh6P54276 Gm23745-201ENSMUST00000104230 125 ntBASIC14.28□□□□□ -0.12
Msh6P54276 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Gm11475-201ENSMUST00000118482 476 ntBASIC14.28□□□□□ -0.12
Msh6P54276 Gm6630-201ENSMUST00000119199 454 ntBASIC14.28□□□□□ -0.12
Msh6P54276 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC14.28□□□□□ -0.12
Msh6P54276 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC14.28□□□□□ -0.12
Msh6P54276 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Gm5178-201ENSMUST00000219380 898 ntBASIC14.28□□□□□ -0.12
Msh6P54276 AC169511.1-201ENSMUST00000227639 995 ntBASIC14.28□□□□□ -0.12
Msh6P54276 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC14.28□□□□□ -0.12
Msh6P54276 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Msh6P54276 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.28□□□□□ -0.12
Msh6P54276 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Msh6P54276 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msh6P54276 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msh6P54276 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msh6P54276 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msh6P54276 AC109214.1-201ENSMUST00000219520 1372 ntBASIC14.27□□□□□ -0.12
Msh6P54276 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msh6P54276 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msh6P54276 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msh6P54276 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msh6P54276 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.27□□□□□ -0.12
Msh6P54276 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msh6P54276 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Msh6P54276 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msh6P54276 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msh6P54276 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC14.27□□□□□ -0.12
Msh6P54276 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Msh6P54276 Gm42660-201ENSMUST00000197733 947 ntBASIC14.27□□□□□ -0.12
Msh6P54276 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC14.27□□□□□ -0.12
Msh6P54276 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msh6P54276 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Msh6P54276 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Msh6P54276 AC102847.1-202ENSMUST00000226313 1245 ntBASIC14.27□□□□□ -0.12
Msh6P54276 Gm26782-203ENSMUST00000227103 751 ntBASIC14.27□□□□□ -0.12
Msh6P54276 Gm9791-201ENSMUST00000060997 447 ntBASIC14.27□□□□□ -0.12
Msh6P54276 Gm25580-201ENSMUST00000083409 327 ntBASIC14.27□□□□□ -0.12
Msh6P54276 Mir326-201ENSMUST00000083637 95 ntBASIC14.27□□□□□ -0.12
Msh6P54276 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msh6P54276 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msh6P54276 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msh6P54276 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msh6P54276 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msh6P54276 Gm43972-201ENSMUST00000181398 1467 ntBASIC14.27□□□□□ -0.13
Msh6P54276 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Msh6P54276 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Msh6P54276 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Msh6P54276 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Msh6P54276 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC14.27□□□□□ -0.13
Msh6P54276 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Msh6P54276 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Msh6P54276 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Msh6P54276 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms