Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 Gm9673-201ENSMUST00000119287 781 ntBASIC11.3□□□□□ -0.6
Atxn1P54254 Gm11783-201ENSMUST00000119549 885 ntBASIC11.3□□□□□ -0.6
Atxn1P54254 Gm16459-201ENSMUST00000121443 686 ntBASIC11.3□□□□□ -0.6
Atxn1P54254 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC11.3□□□□□ -0.6
Atxn1P54254 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 Gm4868-201ENSMUST00000164138 789 ntBASIC11.3□□□□□ -0.6
Atxn1P54254 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 Gm9162-201ENSMUST00000182081 991 ntBASIC11.3□□□□□ -0.6
Atxn1P54254 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Atxn1P54254 Gm4034-201ENSMUST00000187674 480 ntBASIC11.3□□□□□ -0.6
Atxn1P54254 Gm37197-201ENSMUST00000195607 401 ntBASIC11.3□□□□□ -0.6
Atxn1P54254 Gm45113-201ENSMUST00000207518 165 ntBASIC11.3□□□□□ -0.6
Atxn1P54254 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.3□□□□□ -0.6
Atxn1P54254 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 Gm8768-201ENSMUST00000220020 826 ntBASIC11.3□□□□□ -0.6
Atxn1P54254 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Atxn1P54254 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Atxn1P54254 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Atxn1P54254 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Atxn1P54254 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Atxn1P54254 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.3□□□□□ -0.6
Atxn1P54254 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.3□□□□□ -0.6
Atxn1P54254 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Atxn1P54254 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.3□□□□□ -0.6
Atxn1P54254 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atxn1P54254 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.3□□□□□ -0.6
Atxn1P54254 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Atxn1P54254 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Atxn1P54254 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Atxn1P54254 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Atxn1P54254 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC11.29□□□□□ -0.6
Atxn1P54254 Gm11244-201ENSMUST00000121243 237 ntBASIC11.29□□□□□ -0.6
Atxn1P54254 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.29□□□□□ -0.6
Atxn1P54254 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Gm24943-201ENSMUST00000158329 433 ntBASIC11.29□□□□□ -0.6
Atxn1P54254 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Atxn1P54254 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Atxn1P54254 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Atxn1P54254 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.29□□□□□ -0.6
Atxn1P54254 Gm24809-201ENSMUST00000175318 271 ntBASIC11.29□□□□□ -0.6
Atxn1P54254 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC11.29□□□□□ -0.6
Atxn1P54254 Gm43547-201ENSMUST00000197729 328 ntBASIC11.29□□□□□ -0.6
Atxn1P54254 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.29□□□□□ -0.6
Atxn1P54254 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Atxn1P54254 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.29□□□□□ -0.6
Atxn1P54254 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.29□□□□□ -0.6
Atxn1P54254 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Atxn1P54254 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Atxn1P54254 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.29□□□□□ -0.6
Atxn1P54254 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Atxn1P54254 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.29□□□□□ -0.6
Atxn1P54254 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Atxn1P54254 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.29□□□□□ -0.6
Atxn1P54254 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atxn1P54254 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.28□□□□□ -0.6
Atxn1P54254 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Atxn1P54254 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Atxn1P54254 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11.28□□□□□ -0.6
Atxn1P54254 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Atxn1P54254 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atxn1P54254 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms