Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Sox1P53783 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox1P53783 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sox1P53783 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sox1P53783 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Sox1P53783 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox1P53783 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox1P53783 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox1P53783 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox1P53783 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox1P53783 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.61□□□□□ -0.55
Sox1P53783 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox1P53783 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox1P53783 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox1P53783 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sox1P53783 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox1P53783 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox1P53783 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox1P53783 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.61□□□□□ -0.55
Sox1P53783 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox1P53783 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sox1P53783 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC11.61□□□□□ -0.55
Sox1P53783 Gm6939-201ENSMUST00000122029 864 ntBASIC11.61□□□□□ -0.55
Sox1P53783 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.61□□□□□ -0.55
Sox1P53783 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox1P53783 Gm26943-201ENSMUST00000182295 957 ntBASIC11.61□□□□□ -0.55
Sox1P53783 Gm21577-201ENSMUST00000190823 697 ntBASIC11.61□□□□□ -0.55
Sox1P53783 Gm20802-201ENSMUST00000190832 698 ntBASIC11.61□□□□□ -0.55
Sox1P53783 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Sox1P53783 AC132384.2-201ENSMUST00000218018 526 ntBASIC11.61□□□□□ -0.55
Sox1P53783 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sox1P53783 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox1P53783 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.61□□□□□ -0.55
Sox1P53783 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox1P53783 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Sox1P53783 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC11.61□□□□□ -0.55
Sox1P53783 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Sox1P53783 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox1P53783 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox1P53783 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Sox1P53783 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC11.6□□□□□ -0.55
Sox1P53783 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.6□□□□□ -0.55
Sox1P53783 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Gm38246-201ENSMUST00000194318 1511 ntBASIC11.6□□□□□ -0.55
Sox1P53783 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.6□□□□□ -0.55
Sox1P53783 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.6□□□□□ -0.55
Sox1P53783 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sox1P53783 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Sox1P53783 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC11.6□□□□□ -0.55
Sox1P53783 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Gm12947-201ENSMUST00000116114 420 ntBASIC11.6□□□□□ -0.55
Sox1P53783 Gm6441-201ENSMUST00000120983 696 ntBASIC11.6□□□□□ -0.55
Sox1P53783 Gm12745-201ENSMUST00000121767 214 ntBASIC11.6□□□□□ -0.55
Sox1P53783 Gm3828-201ENSMUST00000121817 257 ntBASIC11.6□□□□□ -0.55
Sox1P53783 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Gm26379-201ENSMUST00000178125 138 ntBASIC11.6□□□□□ -0.55
Sox1P53783 Gm20091-201ENSMUST00000179683 189 ntBASIC11.6□□□□□ -0.55
Sox1P53783 Gm27316-201ENSMUST00000184884 277 ntBASIC11.6□□□□□ -0.55
Sox1P53783 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC11.6□□□□□ -0.55
Sox1P53783 Gm29067-201ENSMUST00000190821 470 ntBASIC11.6□□□□□ -0.55
Sox1P53783 Gm37009-201ENSMUST00000193297 361 ntBASIC11.6□□□□□ -0.55
Sox1P53783 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.6□□□□□ -0.55
Sox1P53783 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC11.6□□□□□ -0.55
Sox1P53783 AC107711.3-201ENSMUST00000228939 1035 ntBASIC11.6□□□□□ -0.55
Sox1P53783 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Gm22341-201ENSMUST00000083775 129 ntBASIC11.6□□□□□ -0.55
Sox1P53783 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.6□□□□□ -0.55
Sox1P53783 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sox1P53783 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.6□□□□□ -0.55
Sox1P53783 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Sox1P53783 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sox1P53783 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Sox1P53783 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Gm37582-201ENSMUST00000192953 1409 ntBASIC11.6□□□□□ -0.55
Sox1P53783 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms