Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lbx1P52955 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lbx1P52955 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.03□□□□□ -0.64
Lbx1P52955 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lbx1P52955 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lbx1P52955 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.03□□□□□ -0.64
Lbx1P52955 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lbx1P52955 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC11.03□□□□□ -0.64
Lbx1P52955 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lbx1P52955 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lbx1P52955 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lbx1P52955 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lbx1P52955 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lbx1P52955 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.02□□□□□ -0.64
Lbx1P52955 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Lbx1P52955 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Lbx1P52955 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lbx1P52955 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC11.02□□□□□ -0.64
Lbx1P52955 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lbx1P52955 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Lbx1P52955 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC11.02□□□□□ -0.65
Lbx1P52955 Gm7781-201ENSMUST00000117258 788 ntBASIC11.02□□□□□ -0.65
Lbx1P52955 Gm15610-201ENSMUST00000120584 195 ntBASIC11.02□□□□□ -0.65
Lbx1P52955 Gm15329-201ENSMUST00000121408 155 ntBASIC11.02□□□□□ -0.65
Lbx1P52955 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.02□□□□□ -0.65
Lbx1P52955 Gm23899-201ENSMUST00000158112 90 ntBASIC11.02□□□□□ -0.65
Lbx1P52955 Gm20091-201ENSMUST00000179683 189 ntBASIC11.02□□□□□ -0.65
Lbx1P52955 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Lbx1P52955 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC11.02□□□□□ -0.65
Lbx1P52955 Gm37723-201ENSMUST00000194480 565 ntBASIC11.02□□□□□ -0.65
Lbx1P52955 Gm44420-201ENSMUST00000203669 490 ntBASIC11.02□□□□□ -0.65
Lbx1P52955 Gm45893-201ENSMUST00000211899 247 ntBASIC11.02□□□□□ -0.65
Lbx1P52955 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.02□□□□□ -0.65
Lbx1P52955 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Lbx1P52955 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Lbx1P52955 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.02□□□□□ -0.65
Lbx1P52955 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Lbx1P52955 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lbx1P52955 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lbx1P52955 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lbx1P52955 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lbx1P52955 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lbx1P52955 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lbx1P52955 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lbx1P52955 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lbx1P52955 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lbx1P52955 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Lbx1P52955 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.01□□□□□ -0.65
Lbx1P52955 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Lbx1P52955 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Lbx1P52955 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lbx1P52955 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Lbx1P52955 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Lbx1P52955 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lbx1P52955 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lbx1P52955 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lbx1P52955 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lbx1P52955 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.01□□□□□ -0.65
Lbx1P52955 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lbx1P52955 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Lbx1P52955 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Lbx1P52955 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Lbx1P52955 Gm16418-201ENSMUST00000118577 171 ntBASIC11.01□□□□□ -0.65
Lbx1P52955 Gm15702-201ENSMUST00000119680 444 ntBASIC11.01□□□□□ -0.65
Lbx1P52955 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC11.01□□□□□ -0.65
Lbx1P52955 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.01□□□□□ -0.65
Lbx1P52955 Gm23479-201ENSMUST00000158876 122 ntBASIC11.01□□□□□ -0.65
Lbx1P52955 Gm16560-201ENSMUST00000159115 404 ntBASIC11.01□□□□□ -0.65
Lbx1P52955 Gm23694-201ENSMUST00000179335 110 ntBASIC11.01□□□□□ -0.65
Lbx1P52955 Gm7928-201ENSMUST00000181249 701 ntBASIC11.01□□□□□ -0.65
Lbx1P52955 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.01□□□□□ -0.65
Lbx1P52955 Gm19918-201ENSMUST00000194858 400 ntBASIC11.01□□□□□ -0.65
Lbx1P52955 Gm44323-201ENSMUST00000198689 129 ntBASIC11.01□□□□□ -0.65
Lbx1P52955 Gm42821-201ENSMUST00000199771 489 ntBASIC11.01□□□□□ -0.65
Lbx1P52955 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.01□□□□□ -0.65
Lbx1P52955 Gm6794-201ENSMUST00000203829 457 ntBASIC11.01□□□□□ -0.65
Lbx1P52955 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC11.01□□□□□ -0.65
Lbx1P52955 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms