Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox18P43680 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sox18P43680 Gm23675-201ENSMUST00000157311 125 ntBASIC11.17□□□□□ -0.62
Sox18P43680 Gm17192-201ENSMUST00000169031 511 ntBASIC11.17□□□□□ -0.62
Sox18P43680 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Gm6098-201ENSMUST00000180234 330 ntBASIC11.17□□□□□ -0.62
Sox18P43680 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox18P43680 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.17□□□□□ -0.62
Sox18P43680 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox18P43680 Gm3489-201ENSMUST00000190083 528 ntBASIC11.17□□□□□ -0.62
Sox18P43680 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox18P43680 Gm38151-201ENSMUST00000195085 289 ntBASIC11.17□□□□□ -0.62
Sox18P43680 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Lrp1b-212ENSMUST00000204204 798 ntTSL 2 BASIC11.17□□□□□ -0.62
Sox18P43680 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.17□□□□□ -0.62
Sox18P43680 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.17□□□□□ -0.62
Sox18P43680 AC164087.2-201ENSMUST00000216206 1072 ntBASIC11.17□□□□□ -0.62
Sox18P43680 AC153801.1-201ENSMUST00000217904 947 ntBASIC11.17□□□□□ -0.62
Sox18P43680 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.17□□□□□ -0.62
Sox18P43680 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Gpr87-201ENSMUST00000056898 1080 ntBASIC11.17□□□□□ -0.62
Sox18P43680 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC11.17□□□□□ -0.62
Sox18P43680 Gm17415-201ENSMUST00000096427 789 ntBASIC11.17□□□□□ -0.62
Sox18P43680 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox18P43680 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sox18P43680 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox18P43680 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sox18P43680 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sox18P43680 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sox18P43680 Gm37082-201ENSMUST00000192629 1927 ntBASIC11.17□□□□□ -0.62
Sox18P43680 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox18P43680 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sox18P43680 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.16□□□□□ -0.62
Sox18P43680 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Sox18P43680 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.16□□□□□ -0.62
Sox18P43680 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Sox18P43680 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Mir744-201ENSMUST00000103261 100 ntBASIC11.16□□□□□ -0.62
Sox18P43680 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.16□□□□□ -0.62
Sox18P43680 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Gm9166-201ENSMUST00000120293 561 ntBASIC11.16□□□□□ -0.62
Sox18P43680 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.16□□□□□ -0.62
Sox18P43680 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.16□□□□□ -0.62
Sox18P43680 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC11.16□□□□□ -0.62
Sox18P43680 Mir669a-7-201ENSMUST00000180364 87 ntBASIC11.16□□□□□ -0.62
Sox18P43680 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC11.16□□□□□ -0.62
Sox18P43680 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC11.16□□□□□ -0.62
Sox18P43680 Mir669a-6-201ENSMUST00000196127 87 ntBASIC11.16□□□□□ -0.62
Sox18P43680 Mir669a-12-201ENSMUST00000197274 87 ntBASIC11.16□□□□□ -0.62
Sox18P43680 Mir669a-5-201ENSMUST00000197439 87 ntBASIC11.16□□□□□ -0.62
Sox18P43680 Mir669a-10-201ENSMUST00000197745 87 ntBASIC11.16□□□□□ -0.62
Sox18P43680 Mir669a-11-201ENSMUST00000197952 87 ntBASIC11.16□□□□□ -0.62
Sox18P43680 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 Mir669a-4-201ENSMUST00000198665 87 ntBASIC11.16□□□□□ -0.62
Sox18P43680 Mir669a-9-201ENSMUST00000200087 87 ntBASIC11.16□□□□□ -0.62
Sox18P43680 Mir669a-8-201ENSMUST00000200268 87 ntBASIC11.16□□□□□ -0.62
Sox18P43680 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC11.16□□□□□ -0.62
Sox18P43680 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox18P43680 AC116797.2-202ENSMUST00000223587 1017 ntBASIC11.16□□□□□ -0.62
Sox18P43680 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.16□□□□□ -0.62
Sox18P43680 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms