Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Sox6P40645 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Sox6P40645 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.65□□□□□ -0.7
Sox6P40645 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.7
Sox6P40645 Gm5363-201ENSMUST00000211927 938 ntBASIC10.65□□□□□ -0.7
Sox6P40645 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.65□□□□□ -0.7
Sox6P40645 Gm270-201ENSMUST00000223010 976 ntBASIC10.65□□□□□ -0.7
Sox6P40645 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.65□□□□□ -0.7
Sox6P40645 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Sox6P40645 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Sox6P40645 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC10.65□□□□□ -0.7
Sox6P40645 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sox6P40645 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.65□□□□□ -0.71
Sox6P40645 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sox6P40645 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.65□□□□□ -0.71
Sox6P40645 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sox6P40645 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.65□□□□□ -0.71
Sox6P40645 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.65□□□□□ -0.71
Sox6P40645 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Sox6P40645 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Sox6P40645 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.64□□□□□ -0.71
Sox6P40645 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC10.64□□□□□ -0.71
Sox6P40645 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Sox6P40645 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Sox6P40645 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Sox6P40645 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Sox6P40645 Gm15004-201ENSMUST00000119192 630 ntBASIC10.64□□□□□ -0.71
Sox6P40645 Gm14208-201ENSMUST00000119645 678 ntBASIC10.64□□□□□ -0.71
Sox6P40645 Gm12997-201ENSMUST00000120207 640 ntBASIC10.64□□□□□ -0.71
Sox6P40645 Gm12266-201ENSMUST00000120311 962 ntBASIC10.64□□□□□ -0.71
Sox6P40645 Gm24990-201ENSMUST00000157406 323 ntBASIC10.64□□□□□ -0.71
Sox6P40645 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Sox6P40645 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Sox6P40645 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.64□□□□□ -0.71
Sox6P40645 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.64□□□□□ -0.71
Sox6P40645 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.64□□□□□ -0.71
Sox6P40645 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.64□□□□□ -0.71
Sox6P40645 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Sox6P40645 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.64□□□□□ -0.71
Sox6P40645 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Sox6P40645 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Sox6P40645 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Sox6P40645 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
Sox6P40645 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sox6P40645 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Sox6P40645 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Sox6P40645 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.63□□□□□ -0.71
Sox6P40645 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
Sox6P40645 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.63□□□□□ -0.71
Sox6P40645 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Sox6P40645 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Sox6P40645 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sox6P40645 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms