Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.48□□□□□ -0.73
Sftpa1P35242 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.48□□□□□ -0.73
Sftpa1P35242 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sftpa1P35242 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sftpa1P35242 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Sftpa1P35242 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Gm23745-201ENSMUST00000104230 125 ntBASIC10.47□□□□□ -0.73
Sftpa1P35242 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC10.47□□□□□ -0.73
Sftpa1P35242 Gm9625-201ENSMUST00000180422 955 ntBASIC10.47□□□□□ -0.73
Sftpa1P35242 Mir6953-201ENSMUST00000184745 68 ntBASIC10.47□□□□□ -0.73
Sftpa1P35242 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC10.47□□□□□ -0.73
Sftpa1P35242 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Sftpa1P35242 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.47□□□□□ -0.73
Sftpa1P35242 Gm44124-201ENSMUST00000204159 472 ntBASIC10.47□□□□□ -0.73
Sftpa1P35242 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 AC102847.1-202ENSMUST00000226313 1245 ntBASIC10.47□□□□□ -0.73
Sftpa1P35242 AC164099.1-201ENSMUST00000227780 333 ntBASIC10.47□□□□□ -0.73
Sftpa1P35242 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sftpa1P35242 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.47□□□□□ -0.73
Sftpa1P35242 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Sftpa1P35242 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sftpa1P35242 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sftpa1P35242 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Sftpa1P35242 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.46□□□□□ -0.73
Sftpa1P35242 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sftpa1P35242 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.46□□□□□ -0.73
Sftpa1P35242 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Sftpa1P35242 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.46□□□□□ -0.73
Sftpa1P35242 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sftpa1P35242 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sftpa1P35242 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC10.46□□□□□ -0.73
Sftpa1P35242 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.46□□□□□ -0.73
Sftpa1P35242 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.46□□□□□ -0.73
Sftpa1P35242 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.46□□□□□ -0.73
Sftpa1P35242 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC10.46□□□□□ -0.73
Sftpa1P35242 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Sftpa1P35242 Gm17796-201ENSMUST00000189015 1213 ntBASIC10.46□□□□□ -0.73
Sftpa1P35242 Gm38314-201ENSMUST00000195709 625 ntBASIC10.46□□□□□ -0.73
Sftpa1P35242 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Sftpa1P35242 AC164556.1-201ENSMUST00000221318 751 ntBASIC10.46□□□□□ -0.73
Sftpa1P35242 Gm18065-201ENSMUST00000221395 526 ntBASIC10.46□□□□□ -0.73
Sftpa1P35242 AC154759.1-201ENSMUST00000224137 1159 ntBASIC10.46□□□□□ -0.73
Sftpa1P35242 AC137871.1-201ENSMUST00000228278 475 ntBASIC10.46□□□□□ -0.73
Sftpa1P35242 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sftpa1P35242 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sftpa1P35242 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sftpa1P35242 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sftpa1P35242 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sftpa1P35242 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sftpa1P35242 Gm6478-201ENSMUST00000099450 742 ntBASIC10.46□□□□□ -0.73
Sftpa1P35242 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC10.46□□□□□ -0.73
Sftpa1P35242 Gm5308-201ENSMUST00000196752 1354 ntBASIC10.46□□□□□ -0.74
Sftpa1P35242 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.46□□□□□ -0.74
Sftpa1P35242 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sftpa1P35242 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.46□□□□□ -0.74
Sftpa1P35242 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sftpa1P35242 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.46□□□□□ -0.74
Sftpa1P35242 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sftpa1P35242 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sftpa1P35242 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sftpa1P35242 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sftpa1P35242 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Sftpa1P35242 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sftpa1P35242 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sftpa1P35242 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sftpa1P35242 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sftpa1P35242 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Sftpa1P35242 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sftpa1P35242 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sftpa1P35242 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sftpa1P35242 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.45□□□□□ -0.74
Sftpa1P35242 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms